MER - Minimal Entity Recognizer
ChEBI - Chemical Entities of Biological Interest
DO - Human Disease Ontology
GO - Gene Ontology
HPO - Human Phenotype Ontology
Influenza, commonly known as "the flu", is an infectious disease caused by an influenza virus. Symptoms can be mild to severe. The most common symptoms include: a high fever, runny nose, sore throat, muscle pains, headache, coughing, and feeling tired ... Acetylcysteine for reducing the oxygen transport and caffeine to stimulate ...
Name of the lexicon to use;
Text to be annotated;
Output is in BeCalm TSV.
This is a demonstration of the tool
Minimal Named-Entity Recognizer (MER)
, using the lexicons generated from May, 2020 versions of WordNet, HPO, GO, ChEBI, RadLex, and DO.
MER: a Shell Script and Annotation Server for Minimal Named Entity Recognition and Linking, 2018 [
MER: a Minimal Named-Entity Recognition Tagger and Annotation Server, 2017 [
This project was developed at LaSIGE, Faculdade de Ciências, Universidade de Lisboa, Portugal by
DeST: Deep Semantic Tagger